Example: GView Results for Job 5

View

The above images are previews of the GView Server analysis. Clicking on the image will display a full size version.

Clicking Launch GView Webstart will open the results in GView, an interactive circular and linear genome viewer, where you can pan, zoom, and interact with the results. GView requires Java 1.6 or greater and at least 512MB of memory.

The Unique Genome analysis type displays the unique genes contained within the reference with respect to the query genomes. These are calculated by performing a BLAST analysis between the reference and query genomes, and only displaying regions where there were no BLAST hits between the reference and query genomes. The slot containing the reference genome displays all the features selected in the Customize and Complete step of the job construction. An example of how to interpret a Unique analysis can be found on the examples page at Unique Analysis Example.

Download

The below table lists a set of downloadable files containing the resulting data of this analysis. There are two types of data that can be downloaded: the GView zip package, and the BLAST results table. The zip package contains all the necessary information to launch GView offline. The BLAST Results table contains the results of the BLAST analyses that were performed on the uploaded data in a tabular format. To launch GView offline, please execute the appropriate QuickLaunch program, either QuickLaunch.bat or QuickLaunch.sh.

FileTypeDescription
gview-all-5.zip GView Data + Executable Contains the resulting data plus the GView executable.
gview-data-5.zip GView Data Contains only the resulting data from the job, not the gview executable.
blast-results-5.csv BLAST Results Table A table of the resulting BLAST hits, in csv format. The results may take a while to download for large data sets.
blast-results-5.xls BLAST Results Table A table of the resulting BLAST hits, in excel format. The results may take a while to download for large data sets.